The detailed information of tRNA gene sequence


Sequence ID>WENV170649394
Genome IDJRYC01004845
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 6602
End posion on genome 6691
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccacctgtt
tRNA gene sequence 
GGGGAGGTGCCAGAGAGGTCGATTGGGGCCGCCTGCTAAGCGGTTACCGGGGTTAAACTC
GGTCATGGGTTCGAATCCCATCCTCCCCGCtc
Downstream region at tRNA end position 
attcgattgt
Secondary structure (Cloverleaf model)
>WENV170649394	Ser	GCT
                   t      GCtc attcgattgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TACCGGGGTTAAACTCGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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