The detailed information of tRNA gene sequence


Sequence ID>WENV170649403
Genome IDJRYC01005567
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 2048
End posion on genome 1955
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acccaaatcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATGGGGGCTTAAACC
TCCATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ctgattcttg
Secondary structure (Cloverleaf model)
>WENV170649403	Ser	GCT
                   c      GCCA ctgattcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGGCTTAAACCTCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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