The detailed information of tRNA gene sequence


Sequence ID>WENV170649428
Genome IDJRYC01007519
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 6527
End posion on genome 6615
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctttagcgaa
tRNA gene sequence 
GGAGGGTTGGCTGAGCGGTTCAAAGCGACGGTTTCGAAAACCGTTCTCCCGAAAGGGAGG
CACAGGTTCAAATCCTGTACCCTCCGCCA
Downstream region at tRNA end position 
cagaggtcac
Secondary structure (Cloverleaf model)
>WENV170649428	Ser	CGA
                   a      GCCA cagaggtcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    G       G T C G       A C A G G     C
    G         | | |                 T T
    T       A A G C
      T C A        G     TCTCCCGAAAGGGAGGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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