The detailed information of tRNA gene sequence


Sequence ID>WENV170649431
Genome IDJRYC01007523
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 3056
End posion on genome 3145
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caataaaatt
tRNA gene sequence 
GGGAAGGTGCCAGAGTGGTTGAATGGGACAGTCTCGAAAACTGTTGTGGGCTCCGGTCCA
CCGAGGGTTCGAATCCCTCCCTTCCCGCCT
Downstream region at tRNA end position 
tacagacctg
Secondary structure (Cloverleaf model)
>WENV170649431	Ser	CGA
                   t      GCCT tacagacctg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGGGCTCCGGTCCACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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