The detailed information of tRNA gene sequence


Sequence ID>WENV170649446
Genome IDJRYC01008114
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 3458
End posion on genome 3534
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cctcttcgtt
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCGCTTCGTTCGGGTCGAAGAGGTCGCCGGTTCGAG
TCCGGCCACCCCGACAA
Downstream region at tRNA end position 
aaaaaccgca
Secondary structure (Cloverleaf model)
>WENV170649446	Pro	CGG
                   t      ACAA aaaaaccgca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G G C C     A
      C G A        G      | | | | |     G
    C       C G C G       G C C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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