The detailed information of tRNA gene sequence


Sequence ID>WENV170649493
Genome IDJRYC01011991
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1343
End posion on genome 1432
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaagatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTGCGTGAAAGCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cgtaacctat
Secondary structure (Cloverleaf model)
>WENV170649493	Ser	GGA
                   c      GCCA cgtaacctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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