The detailed information of tRNA gene sequence


Sequence ID>WENV170649513
Genome IDJRYC01013555
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 101
End posion on genome 12
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacggttcgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAACGCGTGTGTGCGGGAAACCGTA
CCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
ccaacctaat
Secondary structure (Cloverleaf model)
>WENV170649513	Ser	GGA
                   c      GCCA ccaacctaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCGGGAAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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