The detailed information of tRNA gene sequence


Sequence ID>WENV170649517
Genome IDJRYC01014006
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 3811
End posion on genome 3721
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgtttgcct
tRNA gene sequence 
GGAGAGATGTCCGAGAGGCTGAAGGAACGCGACTGGAAATCGCGTGTAGTGCCAAAAGCG
CTACCGTGGGTTCGAATCCCACTCTCTCCGCat
Downstream region at tRNA end position 
ttacccctta
Secondary structure (Cloverleaf model)
>WENV170649517	Ser	GGA
                   t      GCat ttacccctta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        A     TGTAGTGCCAAAAGCGCTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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