The detailed information of tRNA gene sequence


Sequence ID>WENV170649528
Genome IDJRYC01015933
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 768
End posion on genome 681
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttatcaattt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCGTAAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
aaaagggaca
Secondary structure (Cloverleaf model)
>WENV170649528	Ser	CGA
                   t      GCtg aaaagggaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGCCGTAAGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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