The detailed information of tRNA gene sequence


Sequence ID>WENV170649536
Genome IDJRYC01016855
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1373
End posion on genome 1287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaacatctg
tRNA gene sequence 
GGACGGTTGGGTGAGTGGCCATACCAGCGGCTTGCTAAGCCGTAGCACCTTCGGGTGCCG
CAGGTTCGAATCCTGCACCGTCCGCCA
Downstream region at tRNA end position 
tcgcgctctc
Secondary structure (Cloverleaf model)
>WENV170649536	Ser	GCT
                   g      GCCA tcgcgctctc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C A G G     C
    G       + | | |                 T T
    C       T A C C
      C A          A     AGCACCTTCGGGTGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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