The detailed information of tRNA gene sequence


Sequence ID>WENV170649558
Genome IDJRYC01020426
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 6493
End posion on genome 6566
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggtccacacc
tRNA gene sequence 
GGGCCCGTAGTACACCGGTAGTATAACTCCATGGCATGGAGTAGAAAGGGGTTCAATTCC
CCTCGGGTCCACTA
Downstream region at tRNA end position 
atcgcaccat
Secondary structure (Cloverleaf model)
>WENV170649558	Ala	GGC
                   c      ACTA atcgcaccat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
        C A        A      | | | | |     A
      C     C A T G       A G G G G     C
      G     | | | +                 T T
      G     G T A T
        T A        A     AGAA
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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