The detailed information of tRNA gene sequence


Sequence ID>WENV170649574
Genome IDJRYC01026013
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 10097
End posion on genome 10186
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtccgatcc
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGTGCAAGCCCA
CCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
gcccagcact
Secondary structure (Cloverleaf model)
>WENV170649574	Ser	TGA
                   c      GCCA gcccagcact
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGTGCAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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