The detailed information of tRNA gene sequence


Sequence ID>WENV170649583
Genome IDJRYC01028781
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 3191
End posion on genome 3286
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gagagcgctc
tRNA gene sequence 
GGAGGCGTTTAGGTTCCTGGTGGTCCTCCCGGTCTTCAAAACCGGTGAGACCGAGTAGCT
CGGTCTGGCAGGTTCGATTCCTGTCCGCCTCCGCCA
Downstream region at tRNA end position 
atcgctgcaa
Secondary structure (Cloverleaf model)
>WENV170649583	SeC(p)	TCA
                   c      GCCA atcgctgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G T C C     A
      C C T        T      + | | | |     G
    T       T G G A       G C A G G     C
    G         | | |                 T T
    G       T C C T
      T G G        C     TGAGACCGAGTAGCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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