The detailed information of tRNA gene sequence


Sequence ID>WENV170649605
Genome IDJRYC01034805
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 137
End posion on genome 46
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatatttgtc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGACGATTGCGGCGGTCTTGAAAACCGTTGTTCCGAGTGATCGG
GACCGAGGGTTCGAATCCCTCTCTCTCCTCCA
Downstream region at tRNA end position 
gttttttatg
Secondary structure (Cloverleaf model)
>WENV170649605	Ser	TGA
                   c      TCCA gttttttatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGTTCCGAGTGATCGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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