The detailed information of tRNA gene sequence


Sequence ID>WENV170649613
Genome IDJRYC01037333
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1611
End posion on genome 1701
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaattttaac
tRNA gene sequence 
GGAGACGTGGCTGAGCGGCTGAAAGCGGCGGTTTGCTAAATCGTTGTACTCCAAAAGGGT
ACCACAGGTTCGAATCCTGTCGTCTCCGCCA
Downstream region at tRNA end position 
tcaacttcaa
Secondary structure (Cloverleaf model)
>WENV170649613	Ser	GCT
                   c      GCCA tcaacttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TGTACTCCAAAAGGGTACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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