The detailed information of tRNA gene sequence


Sequence ID>WENV170649663
Genome IDJRYC01054116
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 434
End posion on genome 530
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccatcgcccc
tRNA gene sequence 
GGGAGCGGATGGGTCCCGGTGGGTCCCCTGGTCTTCAAAACCAGTGGCGCGGCACCAGGT
GCAGCGCGGTGGGTTCGACTCCCACGCGTTCCCGCCA
Downstream region at tRNA end position 
cggaggcaag
Secondary structure (Cloverleaf model)
>WENV170649663	SeC(p)	TCA
                   c      GCCA cggaggcaag
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGCGCGGCACCAGGTGCAGCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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