The detailed information of tRNA gene sequence


Sequence ID>WENV170649672
Genome IDJRYC01059916
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1015
End posion on genome 925
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcttggcga
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGGCAAAACCGT
ATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
taagttattg
Secondary structure (Cloverleaf model)
>WENV170649672	Ser	GGA
                   a      GCCA taagttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGCAAAACCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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