The detailed information of tRNA gene sequence


Sequence ID>WENV170649699
Genome IDJRYC01074631
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 175
End posion on genome 89
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattgccgac
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCCTGGAACGCGGGTTGGGTTAACAGCCCT
CAGGGGTTCAAATCCCCTATCCTCCGCac
Downstream region at tRNA end position 
tcgggtccgg
Secondary structure (Cloverleaf model)
>WENV170649699	Ser	GGA
                   c      GCac tcgggtccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAACAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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