The detailed information of tRNA gene sequence


Sequence ID>WENV170649732
Genome IDJRYC01096318
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1195
End posion on genome 1122
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGCGAGTTCGATC
CCCGCCGCCCCTGCtg
Downstream region at tRNA end position 
gggaggcgcg
Secondary structure (Cloverleaf model)
>WENV170649732	Trp	CCA
                   n      GCtg gggaggcgcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C T
                    T     C G C C C     A
      T A A        A      | | |   |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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