The detailed information of tRNA gene sequence


Sequence ID>WENV170649747
Genome IDJRYC01103258
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 399
End posion on genome 312
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actggcaatt
tRNA gene sequence 
GGAGGGTTCGCATAGCGGTCTAGTGCGCATGCTTGGAAAGCGTGTGTGGGGAAACCCACC
AGGAGTTCGAATCTCCTACCCTCCGCAA
Downstream region at tRNA end position 
cgacacaact
Secondary structure (Cloverleaf model)
>WENV170649747	Ser	GGA
                   t      GCAA cgacacaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T C C T C     A
      C G A        C      | | | | |     G
    G       T A C G       A G G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGGGGAAACCCACC
                    C - G
                    A - T
                    T + G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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