The detailed information of tRNA gene sequence


Sequence ID>WENV170649753
Genome IDJRYC01107971
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 122
End posion on genome 211
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttgaatgaa
tRNA gene sequence 
GGAGACGTGGCTGAGTGGTCGAAAGCGCCTCACTGCTAACGAGGTGTGCCCTAACCGGTA
CCATGGGTTCGAATCCCATCGTCTCCGCTA
Downstream region at tRNA end position 
gagttttgaa
Secondary structure (Cloverleaf model)
>WENV170649753	Ser	GCT
                   a      GCTA gagttttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTGCCCTAACCGGTACC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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