The detailed information of tRNA gene sequence


Sequence ID>WENV170649758
Genome IDJRYC01111694
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 138
End posion on genome 230
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttggcaattt
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAGCCGCCTGCTAAGCGGTTGTAGTGCCAAAAGCG
CTACCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttcagcgccg
Secondary structure (Cloverleaf model)
>WENV170649758	Ser	GCT
                   t      GCCA ttcagcgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     TGTAGTGCCAAAAGCGCTACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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