The detailed information of tRNA gene sequence


Sequence ID>WENV170649778
Genome IDJRYC01130925
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 38
End posion on genome 128
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgcttccac
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTGGGGTAATACCCT
ACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaatacctag
Secondary structure (Cloverleaf model)
>WENV170649778	Ser	GGA
                   c      GCCA gaatacctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTGGGGTAATACCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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