The detailed information of tRNA gene sequence


Sequence ID>WENV170649792
Genome IDJRYC01143487
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 239
End posion on genome 329
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcttccac
tRNA gene sequence 
GGAGAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTAGGGTAATACCCT
AACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaatannnnn
Secondary structure (Cloverleaf model)
>WENV170649792	Ser	GGA
                   c      GCCA gaatannnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTAGGGTAATACCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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