The detailed information of tRNA gene sequence


Sequence ID>WENV170649793
Genome IDJRYC01145295
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 160
End posion on genome 71
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtacattt
tRNA gene sequence 
GGAGAGGTCGCATAGTTCGGCTTAGTGCGCACGATTGGAAATCGTGTACCTCGCAAGGGG
TCGCGGGTTCGAATCCCGCCCTCTCCGCCT
Downstream region at tRNA end position 
gacctgaacg
Secondary structure (Cloverleaf model)
>WENV170649793	Ser	GGA
                   t      GCCT gacctgaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    C T T A        G     TACCTCGCAAGGGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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