The detailed information of tRNA gene sequence


Sequence ID>WENV170649819
Genome IDJRYC01175597
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 393
End posion on genome 305
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtgaggttT
tRNA gene sequence 
GGAAGGATGCTGGAGTGGTCTAACAGCACAGTCTCGAAAACTGCTGGGGGAGAAATCTCC
ACCTGGGTTCGAATCCCAGTCCTTCTGTat
Downstream region at tRNA end position 
ctgaagtact
Secondary structure (Cloverleaf model)
>WENV170649819	Ser	CGA
                   T      GTat ctgaagtact
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       C T G G G     C
    G         | | |                 T T
    T       A C A G
      C T A        C     TGGGGGAGAAATCTCCAC
                    A   C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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