The detailed information of tRNA gene sequence


Sequence ID>WENV170649836
Genome IDJRYC01182908
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 333
End posion on genome 257
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttcgacga
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGCTAGAGCGTCGGTCTCCAAAACCGAAGGCCGCGGGTTCGAT
TCCTGCCACCCCTGCCA
Downstream region at tRNA end position 
gtaattattc
Secondary structure (Cloverleaf model)
>WENV170649836	Trp	CCA
                   a      GCCA gtaattattc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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