The detailed information of tRNA gene sequence


Sequence ID>WENV170649837
Genome IDJRYC01183419
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 404
End posion on genome 493
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctattttgt
tRNA gene sequence 
GGAGGAATGGCCGAGTGGTTTAAGGCAGCAGTCTTGAAAACTGCCGTAGGCGCAAGTCTA
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
ccccctttta
Secondary structure (Cloverleaf model)
>WENV170649837	Ser	TGA
                   t      GCCA ccccctttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A   G
                     A   C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTAGGCGCAAGTCTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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