The detailed information of tRNA gene sequence


Sequence ID>WENV170650352
Genome IDJRYD01099708
Search identical group
Phylum/Class[JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO
Species
Start position on genome 160
End posion on genome 236
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aggctggctg
tRNA gene sequence 
GGGCGCGTAGCTCAGGCGGTCAGAGCGCGGCCCTGATAAGGCCGAGGCCCCTGGTTCGAG
TCCAGGCGCGCCCACCC
Downstream region at tRNA end position 
ccgggggttc
Secondary structure (Cloverleaf model)
>WENV170650352	Ile	GAT
                   g      ACCC ccgggggttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     G G A C C     A
      G G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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