The detailed information of tRNA gene sequence


Sequence ID>WENV170651031
Genome IDJRYF01000017
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 127027
End posion on genome 127117
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtcatccT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGTGCATGCTTGGAAAGCATGTGTACGGGTAACACCG
TACCGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
cattttgcag
Secondary structure (Cloverleaf model)
>WENV170651031	Ser	GGA
                   T      GTtt cattttgcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | |                   T T
    C       A G G T
      T G A        G     TGTACGGGTAACACCGTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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