The detailed information of tRNA gene sequence


Sequence ID>WENV170651049
Genome IDJRYF01000233
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2347
End posion on genome 2423
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggccctggc
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTCAGAGCAGAGGACTCATAATCCTTTGGTCGCTGGTTCGAG
CCCAGCACGGCCTACCA
Downstream region at tRNA end position 
acctgcccga
Secondary structure (Cloverleaf model)
>WENV170651049	Met	CAT
                   c      ACCA acctgcccga
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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