The detailed information of tRNA gene sequence


Sequence ID>WENV170651052
Genome IDJRYF01000272
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 24888
End posion on genome 24964
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccttctttT
tRNA gene sequence 
AGGAGCGTAGCTCAATTGGCAGAGCACCGGTTTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCGCTCCTGTCC
Downstream region at tRNA end position 
tgcaagctcg
Secondary structure (Cloverleaf model)
>WENV170651052	Trp	CCA
                   T      GTCC tgcaagctcg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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