The detailed information of tRNA gene sequence


Sequence ID>WENV170651061
Genome IDJRYF01000380
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 5029
End posion on genome 5104
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cggaaacgtc
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTTGGTCGTAGGTTCGAAT
CCTACAGGGCCCACCA
Downstream region at tRNA end position 
gtcttcacca
Secondary structure (Cloverleaf model)
>WENV170651061	Lys	CTT
                   c      ACCA gtcttcacca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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