The detailed information of tRNA gene sequence


Sequence ID>WENV170651066
Genome IDJRYF01000420
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 114298
End posion on genome 114224
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatctatta
tRNA gene sequence 
GGCGGCGTAGCTCAGCGGAAGAGCAAAGGTCTCATAAACCTTGGGTCGGAGGTTCAAATC
CTCCCGCCGCAACCA
Downstream region at tRNA end position 
ttattgctaa
Secondary structure (Cloverleaf model)
>WENV170651066	Met	CAT
                   a      ACCA ttattgctaa
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
        G A        A      | | | | |     A
      C     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     GGGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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