The detailed information of tRNA gene sequence


Sequence ID>WENV170651069
Genome IDJRYF01000426
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1273
End posion on genome 1197
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcctgagctt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCAACTGCTTTGGGAGCAGTGGGTCGCACGTTCGAA
TCGTGTCACCCCGACCA
Downstream region at tRNA end position 
tggggctccg
Secondary structure (Cloverleaf model)
>WENV170651069	Pro	TGG
                   t      ACCA tggggctccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T G C     A
      C G A        A      + | | | |     G
    C       C G C G       G C A C G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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