The detailed information of tRNA gene sequence


Sequence ID>WENV170651070
Genome IDJRYF01000438
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 15187
End posion on genome 15112
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggagtccgc
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
gccgctgaag
Secondary structure (Cloverleaf model)
>WENV170651070	Trp	CCA
                   c      GCCA gccgctgaag
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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