The detailed information of tRNA gene sequence


Sequence ID>WENV170651072
Genome IDJRYF01000479
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 127377
End posion on genome 127451
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagaaatgaT
tRNA gene sequence 
TGCGGGGTAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCGAGT
CCAGCCCCCGCTATnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170651072	Met	CAT
                   T      ATnn nnnnnnnnnn
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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