The detailed information of tRNA gene sequence


Sequence ID>WENV170651081
Genome IDJRYF01000545
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 116787
End posion on genome 116861
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgaggctcat
tRNA gene sequence 
GTCCGGTTCGTCTAGGGGTTAGGACACCGCCCTTTCACGGCGGCAACACGGGTTCAAATC
CCGTACCGGATACCA
Downstream region at tRNA end position 
tctttaacgg
Secondary structure (Cloverleaf model)
>WENV170651081	Glu	TTC
                   t      ACCA tctttaacgg
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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