The detailed information of tRNA gene sequence


Sequence ID>WENV170651090
Genome IDJRYF01000622
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3522
End posion on genome 3446
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatgtttat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCAGGTAGCTCGTTGGGCTCATAACCCAAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
atttttgggg
Secondary structure (Cloverleaf model)
>WENV170651090	Met	CAT
                   t      ACCA atttttgggg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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