The detailed information of tRNA gene sequence


Sequence ID>WENV170651093
Genome IDJRYF01000623
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1083
End posion on genome 1010
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaatttggat
tRNA gene sequence 
GGGGATGTAGCTCAATTGGGAGAGCGCCGCCTTTGCACGGCGGAGGCCAGGGGTTCGAAT
CCCCTCATCTCCACtc
Downstream region at tRNA end position 
tttgagtacg
Secondary structure (Cloverleaf model)
>WENV170651093	Ala	TGC
                   t      ACtc tttgagtacg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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