The detailed information of tRNA gene sequence


Sequence ID>WENV170651096
Genome IDJRYF01000672
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 31455
End posion on genome 31367
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatacaattT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCCGCATTCGAAATGCGGTCTGCGGGTAACTGCA
GCGGGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
cattttgcag
Secondary structure (Cloverleaf model)
>WENV170651096	Ser	CGA
                   T      GTtt cattttgcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TCTGCGGGTAACTGCAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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