The detailed information of tRNA gene sequence


Sequence ID>WENV170651099
Genome IDJRYF01000701
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 234225
End posion on genome 234152
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagcatcgtc
tRNA gene sequence 
GGCCGCGTGCCCGAGTGGACTAAGGGAGCGGATTGCAAATCCGTGATTCGTCGGTTCGAA
TCCGACCGCGGCCTgtt
Downstream region at tRNA end position 
ttcgggtggg
Secondary structure (Cloverleaf model)
>WENV170651099	Cys	GCA
                   c      Tgtt ttcgggtggg
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    G       G C C C       G T C G G     C
    G         | | |                 T T
    A       A G G G
      C T A        A     GATTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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