The detailed information of tRNA gene sequence


Sequence ID>WENV170651103
Genome IDJRYF01000773
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 46972
End posion on genome 46899
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ggcctatccg
tRNA gene sequence 
GCCCCCATCGTCTAGTGGCCTAGGATATCAGGTTCTCATCCTGGAGACCGGGGTTCGAGT
CCCCGTGGGGGTGCat
Downstream region at tRNA end position 
tcgcacgagc
Secondary structure (Cloverleaf model)
>WENV170651103	Glu	CTC
                   g      GCat tcgcacgagc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     AGAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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