The detailed information of tRNA gene sequence


Sequence ID>WENV170651106
Genome IDJRYF01000805
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 9023
End posion on genome 9114
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accacgcgca
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTTCAGGGGTTCTCCCC
TGACGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
gcaacccgag
Secondary structure (Cloverleaf model)
>WENV170651106	Ser	CGA
                   a      GCCA gcaacccgag
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TTCAGGGGTTCTCCCCTGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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