The detailed information of tRNA gene sequence


Sequence ID>WENV170651112
Genome IDJRYF01000866
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2370
End posion on genome 2283
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggagcctcct
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGATTGCGGCGGTCTTGAAAACCGTTGACCCGCGAGGGTCC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atccttgctt
Secondary structure (Cloverleaf model)
>WENV170651112	Ser	TGA
                   t      GCCA atccttgctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACCCGCGAGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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