The detailed information of tRNA gene sequence


Sequence ID>WENV170651113
Genome IDJRYF01000871
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 23605
End posion on genome 23530
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gccgtcatca
tRNA gene sequence 
GCCGGTGTAGCTCAGTTGGTAGAGCAGTTGATTTGTAATCATCAGGTCGGGGGTTCAAGT
CCCTTCACCGGCTCCA
Downstream region at tRNA end position 
atcttttcaa
Secondary structure (Cloverleaf model)
>WENV170651113	Thr	TGT
                   a      TCCA atcttttcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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