The detailed information of tRNA gene sequence


Sequence ID>WENV170651115
Genome IDJRYF01000889
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 320923
End posion on genome 320833
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagcagaac
tRNA gene sequence 
GGAGACGTGGCTGAGCGGCTGAAAGCGGCGGTTTGCTAAATCGTTAAGGGTCAAAAGCCC
TTCACAGGTTCGAATCCTGTCGTCTCCGCCA
Downstream region at tRNA end position 
tagtttcgag
Secondary structure (Cloverleaf model)
>WENV170651115	Ser	GCT
                   c      GCCA tagtttcgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TAAGGGTCAAAAGCCCTTC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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