The detailed information of tRNA gene sequence


Sequence ID>WENV170651116
Genome IDJRYF01000889
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 294486
End posion on genome 294400
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gttcgtccgt
tRNA gene sequence 
GCGGACGTGGCGGAACTGGTAGACGCGCAGGTCTCAGAAGCCTGTTCTGGTTACAGAGTG
GAAGTTCGATTCTTCTCGTCCGCACCA
Downstream region at tRNA end position 
attaaacttt
Secondary structure (Cloverleaf model)
>WENV170651116	Leu	CAG
                   t      ACCA attaaacttt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T C T T C     A
      C A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTGGTTACAGAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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