The detailed information of tRNA gene sequence


Sequence ID>WENV170651118
Genome IDJRYF01000889
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 161950
End posion on genome 161852
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cctttcgttg
tRNA gene sequence 
GGAGGCGCATGCCGTCCGGTGATGGTCGCGGTCTTCAAAACCGTTAGCGAGTACGCGAGA
GCGTACTTGGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
ttcctatcat
Secondary structure (Cloverleaf model)
>WENV170651118	SeC(p)	TCA
                   g      GCCA ttcctatcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | +                 T T
    T       T G G T
      G A          C     TAGCGAGTACGCGAGAGCGTACTTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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