The detailed information of tRNA gene sequence


Sequence ID>WENV170651122
Genome IDJRYF01001039
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 43420
End posion on genome 43349
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cttaatacaa
tRNA gene sequence 
GGTCGCGTGGCCGAGTGGCTAGGCACAGCTCTGCAAAAGCTTGTACGGCGGTTCGAATCC
GTCCGCGACCTCac
Downstream region at tRNA end position 
tcaaaaagca
Secondary structure (Cloverleaf model)
>WENV170651122	Cys	GCA
                   a      TCac tcaaaaagca
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C T G C C     A
        G A        G      | + | | |     G
      T     G C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     GTAC
                    C   T
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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